Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26421 (4Z,7Z,10Z,13Z,16Z)-19,20-dihydroxydocosa-4,7,10,13,16-pentaenoyl-CoA 1111.3430 1112.3416 116
P26502 15-Deoxyoxalicine A 487.2389 488.2453 116
P30577 Adapalene 412.2048 413.2117 116
P31137 898.3643 899.3679 116
P37682 Plagiochin C 454.1805 455.1891 116
P37841 609.2627 610.2688 116
P43281 Glutamine glutamate aspartate 565.1540 566.1630 116
P43352 Antibiotic X 5108 810.4333 811.4436 116
P43742 Laetiposide D 646.4088 647.4189 116
P49257 PIP(18:3(10,12,15)-OH(9)/16:2(9Z,12Z)) 924.4415 925.4451 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G225000 hypothetical protein NA 0
Glyma.20G225100 hypothetical protein NA 0
Glyma.20G225200 hypothetical protein NA 0
Glyma.20G225300 hypothetical protein NA 0
Glyma.20G225400 hypothetical protein NA 0
Glyma.20G225500 hypothetical protein AT1G08780:AIP3:ABI3-interacting protein 3 0
Glyma.20G225600 hypothetical protein AT1G08770:PRA1.E:prenylated RAB acceptor 1.E 0
Glyma.20G225800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 0
Glyma.20G225900 hypothetical protein NA 0
Glyma.20G226000 hypothetical protein AT3G04630:WDL1:WVD2-like 1__AT5G28646:WVD2:TPX2 (targeting protein for Xklp2) protein family 0