Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P23848		475.0555	476.0632	133
P25001	Leukotriene C5	623.2954	624.3016	133
P29543	Aristoloterpenate II	527.1907	528.1979	133
P30895	1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine	519.2627	520.2710	133
P30962	Spongothymidine	258.0832	259.0902	133
P37482	Pomalidomide	273.0701	274.0768	133
P39497	alpha-Zearalenol	320.1584	321.1667	133
P42354		1044.2354	1045.2401	133
P42759	Resorcinol	110.0355	111.0433	133
P45429		631.2839	632.2928	133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G222700	hypothetical protein	AT5G28900:AT5G28900:Calcium-binding EF-hand family protein
Glyma.20G222900	hypothetical protein	AT1G08610:AT1G08610:Pentatricopeptide repeat (PPR) superfamily protein
Glyma.20G223000	hypothetical protein	AT3G04500:AT3G04500:RNA-binding (RRM/RBD/RNP motifs) family protein
Glyma.20G223100	hypothetical protein	AT3G04510:LSH2:LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Glyma.20G223200	hypothetical protein	AT3G04520:THA2:threonine aldolase 2
Glyma.20G223400	hypothetical protein	NA
Glyma.20G223500	hypothetical protein	AT3G04470:AT3G04470:Ankyrin repeat family protein
Glyma.20G223700	hypothetical protein	AT5G28150:AT5G28150:
Glyma.20G223800	hypothetical protein	NA
Glyma.20G223900	hypothetical protein	NA