Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P29783	Triptregeline I	589.2398	590.2460	138
P30687		623.7960	624.8037	138
P33333		873.1893	874.1999	138
P39647	1,10-Epoxy-aristolane	220.1808	441.3688	138
P41900	Sinuolatin A	396.2153	397.2208	138
P41927	6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide	380.2187	381.2246	138
P43144		545.2495	546.2561	138
P48892	(3E,5Z)-1,3,5-Heptatriene	94.0774	95.0849	138
P51053		519.1231	520.1312	138
P00197		173.0305	174.0385	137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G222700	hypothetical protein	AT5G28900:AT5G28900:Calcium-binding EF-hand family protein
Glyma.20G222900	hypothetical protein	AT1G08610:AT1G08610:Pentatricopeptide repeat (PPR) superfamily protein
Glyma.20G223000	hypothetical protein	AT3G04500:AT3G04500:RNA-binding (RRM/RBD/RNP motifs) family protein
Glyma.20G223100	hypothetical protein	AT3G04510:LSH2:LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Glyma.20G223200	hypothetical protein	AT3G04520:THA2:threonine aldolase 2
Glyma.20G223400	hypothetical protein	NA
Glyma.20G223500	hypothetical protein	AT3G04470:AT3G04470:Ankyrin repeat family protein
Glyma.20G223700	hypothetical protein	AT5G28150:AT5G28150:
Glyma.20G223800	hypothetical protein	NA
Glyma.20G223900	hypothetical protein	NA