Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G222700 hypothetical protein AT5G28900:AT5G28900:Calcium-binding EF-hand family protein 0
Glyma.20G222900 hypothetical protein AT1G08610:AT1G08610:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G223000 hypothetical protein AT3G04500:AT3G04500:RNA-binding (RRM/RBD/RNP motifs) family protein 0
Glyma.20G223100 hypothetical protein AT3G04510:LSH2:LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 0
Glyma.20G223200 hypothetical protein AT3G04520:THA2:threonine aldolase 2 0
Glyma.20G223400 hypothetical protein NA 0
Glyma.20G223500 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 0
Glyma.20G223700 hypothetical protein AT5G28150:AT5G28150: 0
Glyma.20G223800 hypothetical protein NA 0
Glyma.20G223900 hypothetical protein NA 0