Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54862 605.8809 606.8893 —
P54863 605.7784 606.7828 —
P54866 LY201116 240.1275 241.1348 —
P54869 671.1572 672.1693 —
P54870 2-Isopropylfuran 110.0722 221.1514 —
P54871 Candesartan cilexetil 610.2520 611.2601 —
P54872 Kadsurenin B 342.1516 343.1605 —
P54873 689.1570 690.1664 —
P54874 606.9143 607.9211 —
P54875 Orthosiphol L 692.2803 693.2898 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G222700 hypothetical protein AT5G28900:AT5G28900:Calcium-binding EF-hand family protein 0
Glyma.20G222900 hypothetical protein AT1G08610:AT1G08610:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G223000 hypothetical protein AT3G04500:AT3G04500:RNA-binding (RRM/RBD/RNP motifs) family protein 0
Glyma.20G223100 hypothetical protein AT3G04510:LSH2:LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 0
Glyma.20G223200 hypothetical protein AT3G04520:THA2:threonine aldolase 2 0
Glyma.20G223400 hypothetical protein NA 0
Glyma.20G223500 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 0
Glyma.20G223700 hypothetical protein AT5G28150:AT5G28150: 0
Glyma.20G223800 hypothetical protein NA 0
Glyma.20G223900 hypothetical protein NA 0