Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03801 Lapathoside D 634.1878 635.1980 147
P04489 Antibiotic AA 57 312.0761 313.0854 147
P10181 Genistein 7,4'-bis(O-glucosylapioside) 858.2449 859.2537 147
P12065 Cynanoneside A 314.1006 315.1069 147
P12164 Guvacoline 141.0781 142.0853 147
P13121 Callysponginol sulfate A 458.2712 459.2756 147
P22139 27-O-Demethyl-25-O-desacetylrifamycin SV 641.2830 642.2916 147
P22588 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0666 198.0749 147
P27228 957.3498 958.3567 147
P30187 Mpomeovt 1074.4928 1075.4968 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G221500 hypothetical protein AT5G37360:AT5G37360:LOW protein: ammonium transporter 1-like protein 0
Glyma.20G221600 hypothetical protein AT5G38890:AT5G38890:Nucleic acid-binding, OB-fold-like protein 0
Glyma.20G221700 hypothetical protein AT3G04300:AT3G04300:RmlC-like cupins superfamily protein 0
Glyma.20G221800 hypothetical protein AT3G04580:EIN4:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G221900 hypothetical protein NA 0
Glyma.20G222000 hypothetical protein AT3G04570:AHL19:AT-hook motif nuclear-localized protein 19 0
Glyma.20G222100 hypothetical protein AT3G04560:AT3G04560:nucleolar/coiled-body phosphoprotein 0
Glyma.20G222200 hypothetical protein AT3G04550:AT3G04550:rubisco accumulation factor-like protein 0
Glyma.20G222400 hypothetical protein NA 0
Glyma.20G222600 PPCK2 phosphoenolpyruvate carboxylase kinase AT1G08650:PPCK1:phosphoenolpyruvate carboxylase kinase 1 0