Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G221500 hypothetical protein AT5G37360:AT5G37360:LOW protein: ammonium transporter 1-like protein 0
Glyma.20G221600 hypothetical protein AT5G38890:AT5G38890:Nucleic acid-binding, OB-fold-like protein 0
Glyma.20G221700 hypothetical protein AT3G04300:AT3G04300:RmlC-like cupins superfamily protein 0
Glyma.20G221800 hypothetical protein AT3G04580:EIN4:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G221900 hypothetical protein NA 0
Glyma.20G222000 hypothetical protein AT3G04570:AHL19:AT-hook motif nuclear-localized protein 19 0
Glyma.20G222100 hypothetical protein AT3G04560:AT3G04560:nucleolar/coiled-body phosphoprotein 0
Glyma.20G222200 hypothetical protein AT3G04550:AT3G04550:rubisco accumulation factor-like protein 0
Glyma.20G222400 hypothetical protein NA 0
Glyma.20G222600 PPCK2 phosphoenolpyruvate carboxylase kinase AT1G08650:PPCK1:phosphoenolpyruvate carboxylase kinase 1 0