Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P42362 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1878 607.1895 115
P43086 293.6759 294.6839 115
P46452 870.3660 871.3727 115
P49962 5-oxo-hexadecanoic acid 270.2172 271.2241 115
P50483 Deacetylmoxisylyte 237.1743 238.1820 115
P51262 Shizukaol L 648.2633 649.2721 115
P04030 Aurantiomide B 358.1659 359.1731 114
P04949 6'-Apiosyllotaustralin 393.1632 394.1668 114
P05751 6-(alpha-D-Glucosaminyl)-1-phosphatidyl-1D-myo-inositol 551.1353 552.1430 114
P05981 Dikegulac 274.1054 275.1114 114

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G221500 hypothetical protein AT5G37360:AT5G37360:LOW protein: ammonium transporter 1-like protein 0
Glyma.20G221600 hypothetical protein AT5G38890:AT5G38890:Nucleic acid-binding, OB-fold-like protein 0
Glyma.20G221700 hypothetical protein AT3G04300:AT3G04300:RmlC-like cupins superfamily protein 0
Glyma.20G221800 hypothetical protein AT3G04580:EIN4:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G221900 hypothetical protein NA 0
Glyma.20G222000 hypothetical protein AT3G04570:AHL19:AT-hook motif nuclear-localized protein 19 0
Glyma.20G222100 hypothetical protein AT3G04560:AT3G04560:nucleolar/coiled-body phosphoprotein 0
Glyma.20G222200 hypothetical protein AT3G04550:AT3G04550:rubisco accumulation factor-like protein 0
Glyma.20G222400 hypothetical protein NA 0
Glyma.20G222600 PPCK2 phosphoenolpyruvate carboxylase kinase AT1G08650:PPCK1:phosphoenolpyruvate carboxylase kinase 1 0