Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G221500 hypothetical protein AT5G37360:AT5G37360:LOW protein: ammonium transporter 1-like protein 0
Glyma.20G221600 hypothetical protein AT5G38890:AT5G38890:Nucleic acid-binding, OB-fold-like protein 0
Glyma.20G221700 hypothetical protein AT3G04300:AT3G04300:RmlC-like cupins superfamily protein 0
Glyma.20G221800 hypothetical protein AT3G04580:EIN4:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G221900 hypothetical protein NA 0
Glyma.20G222000 hypothetical protein AT3G04570:AHL19:AT-hook motif nuclear-localized protein 19 0
Glyma.20G222100 hypothetical protein AT3G04560:AT3G04560:nucleolar/coiled-body phosphoprotein 0
Glyma.20G222200 hypothetical protein AT3G04550:AT3G04550:rubisco accumulation factor-like protein 0
Glyma.20G222400 hypothetical protein NA 0
Glyma.20G222600 PPCK2 phosphoenolpyruvate carboxylase kinase AT1G08650:PPCK1:phosphoenolpyruvate carboxylase kinase 1 0