Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07144 Diguanosine diphosphate 708.1155 709.1216 121
P07500 Diaveridine 260.1291 261.1357 121
P07947 Valylproline 214.1297 215.1368 121
P08647 5-Deoxy-5-aminoshikimic acid 173.0699 174.0765 121
P13231 Atromentin 324.0635 325.0717 121
P19235 (-)-Oriciacridone A 636.2152 637.2192 121
P27981 Notoamide G 477.2233 478.2307 121
P29119 Validamycin E 659.2616 660.2707 121
P30744 Nifekalant 405.2011 406.2077 121
P33280 (-)-Morphinan 227.1650 228.1726 121

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G219400 hypothetical protein NA 0
Glyma.20G219700 hypothetical protein NA 0
Glyma.20G219800 hypothetical protein AT4G27650:PEL1:Eukaryotic release factor 1 (eRF1) family protein 0
Glyma.20G219900 hypothetical protein NA 0
Glyma.20G220000 hypothetical protein NA 0
Glyma.20G220300 hypothetical protein NA 0
Glyma.20G220400 hypothetical protein NA 0
Glyma.20G220700 hypothetical protein NA 0
Glyma.20G220800 GER11 germin-like protein AT5G39180:AT5G39180:RmlC-like cupins superfamily protein__AT5G39150:AT5G39150:RmlC-like cupins superfamily protein__AT5G39130:AT5G39130:RmlC-like cupins superfamily protein 0
Glyma.20G221300 hypothetical protein NA 0