Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23451 607.2766 608.2820 221
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 186.1473 220
P09835 10-Formyldihydrofolate 471.1494 472.1544 220
P10595 317.1915 318.1977 220
P12478 5,7-octadienoic acid 140.0839 141.0905 220
P19868 Cohaerin C 482.2267 483.2355 220
P30782 Cryptostigmin IV 1030.4967 1031.5022 220
P40362 BL V 424.0812 425.0898 220
P44001 839.4221 840.4307 220
P05350 Methylinoscavin B 450.1344 451.1421 219

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G219400 hypothetical protein NA 0
Glyma.20G219700 hypothetical protein NA 0
Glyma.20G219800 hypothetical protein AT4G27650:PEL1:Eukaryotic release factor 1 (eRF1) family protein 0
Glyma.20G219900 hypothetical protein NA 0
Glyma.20G220000 hypothetical protein NA 0
Glyma.20G220300 hypothetical protein NA 0
Glyma.20G220400 hypothetical protein NA 0
Glyma.20G220700 hypothetical protein NA 0
Glyma.20G220800 GER11 germin-like protein AT5G39180:AT5G39180:RmlC-like cupins superfamily protein__AT5G39150:AT5G39150:RmlC-like cupins superfamily protein__AT5G39130:AT5G39130:RmlC-like cupins superfamily protein 0
Glyma.20G221300 hypothetical protein NA 0