Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43458 818.8998 819.9076 246
P00033 199.9632 200.9692 245
P15417 577.2031 578.2139 244
P41628 Cortolone-3-glucuronide 542.2743 543.2807 243
P09386 2-Methyl-5-vinylpyrazine 120.0674 121.0744 242
P22199 Homaline 490.3360 491.3421 241
P36928 Ligujapone 202.0983 203.1053 241
P39358 5,6-Dehydroalbine 230.1386 461.2870 241
P41069 DG(2:0/22:6(4Z,8Z,10Z,13Z,16Z,19Z)-OH(7)/0:0) 460.2787 461.2856 241
P35092 314.6285 315.6348 240

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G217900 hypothetical protein NA 0
Glyma.20G218000 hypothetical protein NA 0
Glyma.20G218200 hypothetical protein AT1G64720:CP5:Polyketide cyclase/dehydrase and lipid transport superfamily protein 0
Glyma.20G218300 hypothetical protein NA 0
Glyma.20G218400 hypothetical protein AT1G08620:PKDM7D:Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 0
Glyma.20G218600 hypothetical protein AT1G65580:FRA3:Endonuclease/exonuclease/phosphatase family protein 0
Glyma.20G218800 hypothetical protein AT5G16260:ELF9:RNA binding (RRM/RBD/RNP motifs) family protein 0
Glyma.20G219000 hypothetical protein AT5G16490:RIC4:ROP-interactive CRIB motif-containing protein 4 0
Glyma.20G219200 hypothetical protein AT1G65295:AT1G65295:ubiquitin carboxyl-terminal hydrolase 0
Glyma.20G219300 hypothetical protein NA 0