Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48302 Ciprofloxacin 331.1327 332.1422 114
P48655 Hypodematine 247.0963 248.1039 114
P50054 930.4138 931.4203 114
P51460 Veliparib 244.1327 245.1399 114
P54448 Furaptra 434.0660 435.0744 114
P55413 Foetisulfide A 224.0374 225.0446 114
P01836 2-Hydroxynicotinic acid 139.0257 140.0331 113
P05182 5a,11a-Dehydrooxytetracycline 458.1309 459.1380 113
P06695 Glycoperine 391.1328 392.1408 113
P07648 307.0178 308.0261 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G217900 hypothetical protein NA 0
Glyma.20G218000 hypothetical protein NA 0
Glyma.20G218200 hypothetical protein AT1G64720:CP5:Polyketide cyclase/dehydrase and lipid transport superfamily protein 0
Glyma.20G218300 hypothetical protein NA 0
Glyma.20G218400 hypothetical protein AT1G08620:PKDM7D:Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 0
Glyma.20G218600 hypothetical protein AT1G65580:FRA3:Endonuclease/exonuclease/phosphatase family protein 0
Glyma.20G218800 hypothetical protein AT5G16260:ELF9:RNA binding (RRM/RBD/RNP motifs) family protein 0
Glyma.20G219000 hypothetical protein AT5G16490:RIC4:ROP-interactive CRIB motif-containing protein 4 0
Glyma.20G219200 hypothetical protein AT1G65295:AT1G65295:ubiquitin carboxyl-terminal hydrolase 0
Glyma.20G219300 hypothetical protein NA 0