Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55049 Xylaroside B 328.1519 329.1600 —
P55052 284.2780 285.2841 —
P55053 600.7683 601.7714 —
P55057 Cephasugine 347.1721 348.1791 —
P55059 3-Methylnonanoylcarnitine 315.2432 316.2523 —
P55060 265.1400 266.1458 —
P55061 3Z,6Z,9Z-Octadecatriene 248.2467 249.2551 —
P55062 ES 242-1 604.2300 605.2419 —
P55063 Nandrolone phenpropionate 406.2498 407.2583 —
P55064 Yuccaol A 496.1147 497.1224 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G216400 hypothetical protein AT3G05070:AT3G05070:Cwf18 pre-mRNA splicing factor 0
Glyma.20G216500 hypothetical protein NA 0
Glyma.20G216600 hypothetical protein NA 0
Glyma.20G216700 hypothetical protein NA 0
Glyma.20G216800 ALMT34 aluminum-activated malate transporter family protein NA 0
Glyma.20G216900 hypothetical protein AT4G10790:AT4G10790:UBX domain-containing protein 0
Glyma.20G217000 hypothetical protein NA 0
Glyma.20G217200 hypothetical protein AT4G24100:AT4G24100:Protein kinase superfamily protein 0
Glyma.20G217300 hypothetical protein NA 0
Glyma.20G217400 hypothetical protein AT4G24120:YSL1:YELLOW STRIPE like 1 0