Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54876 603.2250 604.2295 —
P54879 531.3880 532.3948 —
P54880 360.2884 361.2940 —
P54883 N-Linoleoyl Valine 379.3058 380.3127 —
P54893 606.8184 607.8238 —
P54895 844.0016 845.0097 —
P54899 Ligurobustoside O 622.2595 623.2642 —
P54900 606.0010 607.0054 —
P54902 NADPH 745.0835 746.0902 —
P54903 606.8463 607.8539 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G215300 hypothetical protein AT4G31330:AT4G31330:transmembrane protein, putative (Protein of unknown function, DUF599) 0
Glyma.20G215400 hypothetical protein NA 0
Glyma.20G215500 hypothetical protein NA 0
Glyma.20G215700 hypothetical protein NA 0
Glyma.20G215800 hypothetical protein AT4G00026:SD3:import inner membrane translocase subunit 0
Glyma.20G215900 hypothetical protein AT1G73210:AT1G73210: 0
Glyma.20G216000 hypothetical protein AT5G08370:AGAL2:alpha-galactosidase 2 0
Glyma.20G216100 hypothetical protein AT1G17810:BETA-TIP:beta-tonoplast intrinsic protein 0
Glyma.20G216200 hypothetical protein NA 0
Glyma.20G216300 hypothetical protein AT1G54540:AT1G54540:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 0