Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54723 108.0103 109.0175 —
P54725 dehydro-beta-Ionone 190.1356 191.1415 —
P54726 Austronine 619.2163 620.2249 —
P54729 TRI-O-CRESYL PHOSPHATE 368.1149 369.1221 —
P54730 1,2-di-(2E,4E-octadienoyl)-sn-glycero-3-phosphocholine 501.2500 502.2556 —
P54731 Austroinulin 322.2473 323.2552 —
P54733 230.8916 231.8991 —
P54734 436.0756 437.0861 —
P54735 Isopyruthaldine 768.3599 769.3663 —
P54737 N-Nitrosobis(2-hydroxypropyl)amine 162.1020 325.2113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G215300 hypothetical protein AT4G31330:AT4G31330:transmembrane protein, putative (Protein of unknown function, DUF599) 0
Glyma.20G215400 hypothetical protein NA 0
Glyma.20G215500 hypothetical protein NA 0
Glyma.20G215700 hypothetical protein NA 0
Glyma.20G215800 hypothetical protein AT4G00026:SD3:import inner membrane translocase subunit 0
Glyma.20G215900 hypothetical protein AT1G73210:AT1G73210: 0
Glyma.20G216000 hypothetical protein AT5G08370:AGAL2:alpha-galactosidase 2 0
Glyma.20G216100 hypothetical protein AT1G17810:BETA-TIP:beta-tonoplast intrinsic protein 0
Glyma.20G216200 hypothetical protein NA 0
Glyma.20G216300 hypothetical protein AT1G54540:AT1G54540:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 0