Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P03225	Chlorambucil-tertiary butyl ester	359.1400	360.1461	210
P05139		310.6259	311.6315	210
P27684		309.2743	310.2795	210
P04549	Cyclosulfamuron	421.1071	422.1091	209
P13108	Bms-707035	410.1081	411.1142	209
P14970	Benzonaphthazepine	243.1062	244.1135	209
P44253		285.6155	286.6223	209
P50982	Oleamide	281.2671	282.2752	209
P16775	PA(10:0/13:0)	522.3343	523.3435	208
P20730	1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol)	516.2330	517.2397	208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G215300	hypothetical protein	AT4G31330:AT4G31330:transmembrane protein, putative (Protein of unknown function, DUF599)
Glyma.20G215400	hypothetical protein	NA
Glyma.20G215500	hypothetical protein	NA
Glyma.20G215700	hypothetical protein	NA
Glyma.20G215800	hypothetical protein	AT4G00026:SD3:import inner membrane translocase subunit
Glyma.20G215900	hypothetical protein	AT1G73210:AT1G73210:
Glyma.20G216000	hypothetical protein	AT5G08370:AGAL2:alpha-galactosidase 2
Glyma.20G216100	hypothetical protein	AT1G17810:BETA-TIP:beta-tonoplast intrinsic protein
Glyma.20G216200	hypothetical protein	NA
Glyma.20G216300	hypothetical protein	AT1G54540:AT1G54540:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family