Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P11240	6-Benzylaminopurine	225.1038	226.1090	123
P15609	2-Isopropylfuran	110.0718	111.0795	123
P15845	Nigrospoxydon C	294.0747	295.0816	123
P17541	17-Ethynyl-16-fluoroestradiol	314.1689	315.1765	123
P17713		939.2673	940.2706	123
P20071	Melochinone	331.1571	332.1663	123
P26120	1,2-dinonanoyl-sn-glycero-3-phosphocholine	537.3455	538.3528	123
P30440	2-Isopropylfuran	110.0717	111.0792	123
P32052	Zanamivir	332.1327	333.1402	123
P33021	7-O-Methyl-N-deacetylipecoside	535.2335	536.2382	123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G215300	hypothetical protein	AT4G31330:AT4G31330:transmembrane protein, putative (Protein of unknown function, DUF599)
Glyma.20G215400	hypothetical protein	NA
Glyma.20G215500	hypothetical protein	NA
Glyma.20G215700	hypothetical protein	NA
Glyma.20G215800	hypothetical protein	AT4G00026:SD3:import inner membrane translocase subunit
Glyma.20G215900	hypothetical protein	AT1G73210:AT1G73210:
Glyma.20G216000	hypothetical protein	AT5G08370:AGAL2:alpha-galactosidase 2
Glyma.20G216100	hypothetical protein	AT1G17810:BETA-TIP:beta-tonoplast intrinsic protein
Glyma.20G216200	hypothetical protein	NA
Glyma.20G216300	hypothetical protein	AT1G54540:AT1G54540:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family