Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31330 Arginine chloride 192.0780 193.0844 125
P42656 605.7500 606.7519 125
P44609 1-Acetoxy-3,15-epoxygymnomitrane 278.1877 279.1947 125
P47637 90.0461 91.0533 125
P47673 90.0465 91.0540 125
P48236 N-Palmitoyl Glutamic acid 385.2787 386.2871 125
P49106 Prodiamine 350.1210 351.1290 125
P50486 5-oxo-7-(S-glutathionyl)-8Z,11Z,14Z-eicosatrienoic acid 597.2751 598.2818 125
P53413 Tetradecyl nicotinate 319.2477 320.2545 125
P00779 2-Methylthio-N6-(delta2-isopentenyl)adenosine 381.1432 382.1491 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G215300 hypothetical protein AT4G31330:AT4G31330:transmembrane protein, putative (Protein of unknown function, DUF599) 0
Glyma.20G215400 hypothetical protein NA 0
Glyma.20G215500 hypothetical protein NA 0
Glyma.20G215700 hypothetical protein NA 0
Glyma.20G215800 hypothetical protein AT4G00026:SD3:import inner membrane translocase subunit 0
Glyma.20G215900 hypothetical protein AT1G73210:AT1G73210: 0
Glyma.20G216000 hypothetical protein AT5G08370:AGAL2:alpha-galactosidase 2 0
Glyma.20G216100 hypothetical protein AT1G17810:BETA-TIP:beta-tonoplast intrinsic protein 0
Glyma.20G216200 hypothetical protein NA 0
Glyma.20G216300 hypothetical protein AT1G54540:AT1G54540:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 0