Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P50234 Triptregeline H 611.2407 612.2490 121
P51058 DG(22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)/20:0/0:0) 728.5564 729.5650 121
P52008 4-Fluoro-N-methyl-L-phenylalanyl-N-methyl-L-valyl-3-(1,1-dimethylethyl)-N-ethyl-L-tyrosinamide 556.3508 557.3556 121
P55272 195.1180 196.1249 121
P00812 HLo7 329.1118 330.1172 120
P06981 135.0636 136.0702 120
P07888 5-Methoxytryptophan 234.1009 235.1072 120
P08097 Alaptide 182.1027 183.1103 120
P11178 709.2161 710.2258 120
P12762 Clorobiocin 696.2097 697.2167 120

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G213900 HSP22.0 AT4G10250:ATHSP22.0:HSP20-like chaperones superfamily protein 0
Glyma.20G214000 hypothetical protein AT5G38520:AT5G38520:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G214100 hypothetical protein NA 0
Glyma.20G214200 hypothetical protein AT4G33420:AT4G33420:Peroxidase superfamily protein 0
Glyma.20G214300 hypothetical protein NA 0
Glyma.20G214400 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 0
Glyma.20G214700 hypothetical protein NA 0
Glyma.20G214800 hypothetical protein NA 0
Glyma.20G214900 hypothetical protein NA 0
Glyma.20G215000 hypothetical protein NA 0