Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P18070	Cymbidine A	949.4154	950.4239	236
P25621	Pseudoanisatin	298.1384	299.1467	236
P47300		534.7868	535.7927	236
P31222	Sufotidine	421.2096	422.2177	235
P03976	Dilmapimod	456.1404	457.1517	234
P53033	7-Oxononane-1,1,9-tricarbaldehyde	226.1222	227.1285	234
P05631	Trimethyl orthoacetate	120.0775	121.0848	233
P13790		317.1926	318.1997	233
P23295	3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester	413.0800	414.0838	233
P11101	L-beta-aspartyl-L-phenylalanine	280.1044	281.1122	231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G211600	hypothetical protein	AT3G22950:ARFC1:ADP-ribosylation factor C1
Glyma.20G211800	hypothetical protein	AT5G51670:AT5G51670:
Glyma.20G211900	hypothetical protein	NA
Glyma.20G212000	hypothetical protein	AT5G51640:YLS7:trichome birefringence-like protein (DUF828)
Glyma.20G212100	hypothetical protein	AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein
Glyma.20G212300	hypothetical protein	NA
Glyma.20G212400	hypothetical protein	NA
Glyma.20G212500	hypothetical protein	NA
Glyma.20G212600	hypothetical protein	NA
Glyma.20G212700	hypothetical protein	AT5G62280:AT5G62280:DUF1442 family protein (DUF1442)