Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54835 Prosulfuron 419.0794 420.0836 —
P54836 2-Ethyldihydro-3(2H)-thiophenone 130.0448 131.0520 —
P54839 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1079 245.2232 —
P54845 dehydro-beta-Ionone 190.1336 381.2740 —
P54848 311.3155 312.3223 —
P54853 607.7454 608.7564 —
P54854 605.8609 606.8659 —
P54856 5,6-Dichloro-1H-benzimidazole 185.9726 186.9795 —
P54857 606.6731 607.6849 —
P54859 N-(2-hydroxy-docosanoyl)-4E,6E-hexadecasphingadienine 607.5576 608.5640 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G211600 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211800 hypothetical protein AT5G51670:AT5G51670: 0
Glyma.20G211900 hypothetical protein NA 0
Glyma.20G212000 hypothetical protein AT5G51640:YLS7:trichome birefringence-like protein (DUF828) 0
Glyma.20G212100 hypothetical protein AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein 0
Glyma.20G212300 hypothetical protein NA 0
Glyma.20G212400 hypothetical protein NA 0
Glyma.20G212500 hypothetical protein NA 0
Glyma.20G212600 hypothetical protein NA 0
Glyma.20G212700 hypothetical protein AT5G62280:AT5G62280:DUF1442 family protein (DUF1442) 0