Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G211600 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211800 hypothetical protein AT5G51670:AT5G51670: 0
Glyma.20G211900 hypothetical protein NA 0
Glyma.20G212000 hypothetical protein AT5G51640:YLS7:trichome birefringence-like protein (DUF828) 0
Glyma.20G212100 hypothetical protein AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein 0
Glyma.20G212300 hypothetical protein NA 0
Glyma.20G212400 hypothetical protein NA 0
Glyma.20G212500 hypothetical protein NA 0
Glyma.20G212600 hypothetical protein NA 0
Glyma.20G212700 hypothetical protein AT5G62280:AT5G62280:DUF1442 family protein (DUF1442) 0