Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P48296	6-Chloro-7,8-dihydroxy-3-allyl-1-phenyl-2,3,4,5-tetrahydro-1H-3-benzazepine	329.1186	330.1296	120
P49853	Phenyl phosphonothioate	173.9908	174.9983	120
P00760	Flustramine H	404.1438	405.1541	119
P02946	Maremycin C1	379.1215	380.1274	119
P05035		350.0293	351.0357	119
P05672	5-Amino-6-(5'-phosphoribosylamino)uracil	354.0577	355.0635	119
P06761	Carthamoside B4	506.1973	507.2035	119
P07748	Bocconoline	379.1471	380.1538	119
P10104		641.2594	642.2689	119
P16160	Ulexone D	418.1443	419.1537	119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G211600	hypothetical protein	AT3G22950:ARFC1:ADP-ribosylation factor C1
Glyma.20G211800	hypothetical protein	AT5G51670:AT5G51670:
Glyma.20G211900	hypothetical protein	NA
Glyma.20G212000	hypothetical protein	AT5G51640:YLS7:trichome birefringence-like protein (DUF828)
Glyma.20G212100	hypothetical protein	AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein
Glyma.20G212300	hypothetical protein	NA
Glyma.20G212400	hypothetical protein	NA
Glyma.20G212500	hypothetical protein	NA
Glyma.20G212600	hypothetical protein	NA
Glyma.20G212700	hypothetical protein	AT5G62280:AT5G62280:DUF1442 family protein (DUF1442)