Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P04174	Mesifurane	142.0615	143.0689	125
P07352	Benzoxazole	119.0351	120.0432	125
P14288	N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide	287.1828	288.1891	125
P16266	Fibraurinoside	534.1755	535.1865	125
P19931	N-Despropyl-rotigotine	273.1184	274.1254	125
P20138	Antibiotic KA 7367B	200.1542	201.1617	125
P20173	Pinocembrin 7-O-neohesperidoside 3'''-O-acetate	606.2006	607.2079	125
P20356	Cochinchinenin	514.2035	515.2126	125
P20898	1,2-Dihydro-1,6,6-trimethylnaphthalene	172.1238	173.1309	125
P30615		384.6477	385.6534	125

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G211600	hypothetical protein	AT3G22950:ARFC1:ADP-ribosylation factor C1
Glyma.20G211800	hypothetical protein	AT5G51670:AT5G51670:
Glyma.20G211900	hypothetical protein	NA
Glyma.20G212000	hypothetical protein	AT5G51640:YLS7:trichome birefringence-like protein (DUF828)
Glyma.20G212100	hypothetical protein	AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein
Glyma.20G212300	hypothetical protein	NA
Glyma.20G212400	hypothetical protein	NA
Glyma.20G212500	hypothetical protein	NA
Glyma.20G212600	hypothetical protein	NA
Glyma.20G212700	hypothetical protein	AT5G62280:AT5G62280:DUF1442 family protein (DUF1442)