Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10912 Luzonoside A 624.2429 625.2544 131
P12415 Euojaponine C 887.2920 888.2965 131
P13473 Cussoracoside C 642.3166 643.3206 131
P15304 Threoninyl-Aspartate 234.0862 235.0941 131
P15354 868.2289 869.2321 131
P15647 Pyrithiamine 258.1525 259.1604 131
P19152 Lophocerine 249.1687 250.1776 131
P25817 Globuloside A 890.2955 891.2990 131
P26151 621.1448 622.1477 131
P27886 Pyripyropene E 451.2329 452.2392 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G211600 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211800 hypothetical protein AT5G51670:AT5G51670: 0
Glyma.20G211900 hypothetical protein NA 0
Glyma.20G212000 hypothetical protein AT5G51640:YLS7:trichome birefringence-like protein (DUF828) 0
Glyma.20G212100 hypothetical protein AT5G51600:PLE:Microtubule associated protein (MAP65/ASE1) family protein 0
Glyma.20G212300 hypothetical protein NA 0
Glyma.20G212400 hypothetical protein NA 0
Glyma.20G212500 hypothetical protein NA 0
Glyma.20G212600 hypothetical protein NA 0
Glyma.20G212700 hypothetical protein AT5G62280:AT5G62280:DUF1442 family protein (DUF1442) 0