Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48190 Norselic acid B 456.3251 457.3331 140
P51989 Clethric acid 504.3413 505.3472 140
P01114 149.0104 150.0180 139
P01443 TRIBOA 197.0306 198.0372 139
P02352 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0672 198.0748 139
P05844 Octanedioylcarnitine 317.1879 318.1957 139
P07296 292.6173 293.6228 139
P08614 N-Butyryl-L-homoserine lactone 171.0875 172.0951 139
P11699 2-(2-Phenylethenylsulfonyl)ethenylbenzene 270.0700 271.0793 139
P12353 Methdilazine 296.1377 297.1442 139

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G210500 hypothetical protein NA 0
Glyma.20G210600 hypothetical protein AT5G43720:AT5G43720:rRNA-processing EFG1-like protein (DUF2361)__AT1G04230:AT1G04230:rRNA-processing EFG1-like protein (DUF2361) 0
Glyma.20G210700 hypothetical protein AT5G43745:AT5G43745:ion channel POLLUX-like protein, putative (DUF1012)__AT5G02940:AT5G02940:ion channel POLLUX-like protein, putative (DUF1012) 0
Glyma.20G210800 hypothetical protein NA 0
Glyma.20G210900 hypothetical protein AT1G04220:KCS2:3-ketoacyl-CoA synthase 2 0
Glyma.20G211000 hypothetical protein AT2G17230:EXL5:EXORDIUM like 5 0
Glyma.20G211100 hypothetical protein AT3G22970:AT3G22970: 0
Glyma.20G211200 hypothetical protein AT3G22960:PKP-ALPHA:Pyruvate kinase family protein 0
Glyma.20G211300 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211400 hypothetical protein AT3G22942:AGG2:G-protein gamma subunit 2 0