Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55180 Haloxyline B 435.3680 436.3770 —
P55183 Ethyl (2S,3S)-3-[[(2S)-1-[[(2S)-1-hydroxypent-4-yn-2-yl]amino]-4-methyl-1-oxopentan-2-yl]carbamoyl]oxirane-2-carboxylate 354.1772 355.1835 —
P55184 Speciosin D 194.0581 195.0659 —
P55188 Prop-2-enylcyclohexane 124.1246 125.1317 —
P55189 15-Acetoxyverruculogen 569.2418 570.2499 —
P55191 609.0476 610.0568 —
P55194 Sarglaperoxide A 384.1932 385.2011 —
P55195 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0982 167.1053 —
P55197 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2686 417.2763 —
P55198 775.2278 776.2313 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G210500 hypothetical protein NA 0
Glyma.20G210600 hypothetical protein AT5G43720:AT5G43720:rRNA-processing EFG1-like protein (DUF2361)__AT1G04230:AT1G04230:rRNA-processing EFG1-like protein (DUF2361) 0
Glyma.20G210700 hypothetical protein AT5G43745:AT5G43745:ion channel POLLUX-like protein, putative (DUF1012)__AT5G02940:AT5G02940:ion channel POLLUX-like protein, putative (DUF1012) 0
Glyma.20G210800 hypothetical protein NA 0
Glyma.20G210900 hypothetical protein AT1G04220:KCS2:3-ketoacyl-CoA synthase 2 0
Glyma.20G211000 hypothetical protein AT2G17230:EXL5:EXORDIUM like 5 0
Glyma.20G211100 hypothetical protein AT3G22970:AT3G22970: 0
Glyma.20G211200 hypothetical protein AT3G22960:PKP-ALPHA:Pyruvate kinase family protein 0
Glyma.20G211300 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211400 hypothetical protein AT3G22942:AGG2:G-protein gamma subunit 2 0