Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54679 357.7333 358.7417 —
P54683 Neoacrimarine D 635.2497 636.2567 —
P54688 2,7-Dideacetyltaxuspine X 682.2954 683.3041 —
P54690 2-(Dimethylamino)acetonitrile 84.0681 85.0754 —
P54692 200.9661 201.9741 —
P54697 160.9610 161.9683 —
P54698 7-O-Acetylpseurata C 432.2164 433.2204 —
P54703 695.3327 696.3404 —
P54706 663.2964 664.3060 —
P54707 Briarlide E 636.2757 637.2796 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G210500 hypothetical protein NA 0
Glyma.20G210600 hypothetical protein AT5G43720:AT5G43720:rRNA-processing EFG1-like protein (DUF2361)__AT1G04230:AT1G04230:rRNA-processing EFG1-like protein (DUF2361) 0
Glyma.20G210700 hypothetical protein AT5G43745:AT5G43745:ion channel POLLUX-like protein, putative (DUF1012)__AT5G02940:AT5G02940:ion channel POLLUX-like protein, putative (DUF1012) 0
Glyma.20G210800 hypothetical protein NA 0
Glyma.20G210900 hypothetical protein AT1G04220:KCS2:3-ketoacyl-CoA synthase 2 0
Glyma.20G211000 hypothetical protein AT2G17230:EXL5:EXORDIUM like 5 0
Glyma.20G211100 hypothetical protein AT3G22970:AT3G22970: 0
Glyma.20G211200 hypothetical protein AT3G22960:PKP-ALPHA:Pyruvate kinase family protein 0
Glyma.20G211300 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211400 hypothetical protein AT3G22942:AGG2:G-protein gamma subunit 2 0