Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G210500 hypothetical protein NA 0
Glyma.20G210600 hypothetical protein AT5G43720:AT5G43720:rRNA-processing EFG1-like protein (DUF2361)__AT1G04230:AT1G04230:rRNA-processing EFG1-like protein (DUF2361) 0
Glyma.20G210700 hypothetical protein AT5G43745:AT5G43745:ion channel POLLUX-like protein, putative (DUF1012)__AT5G02940:AT5G02940:ion channel POLLUX-like protein, putative (DUF1012) 0
Glyma.20G210800 hypothetical protein NA 0
Glyma.20G210900 hypothetical protein AT1G04220:KCS2:3-ketoacyl-CoA synthase 2 0
Glyma.20G211000 hypothetical protein AT2G17230:EXL5:EXORDIUM like 5 0
Glyma.20G211100 hypothetical protein AT3G22970:AT3G22970: 0
Glyma.20G211200 hypothetical protein AT3G22960:PKP-ALPHA:Pyruvate kinase family protein 0
Glyma.20G211300 hypothetical protein AT3G22950:ARFC1:ADP-ribosylation factor C1 0
Glyma.20G211400 hypothetical protein AT3G22942:AGG2:G-protein gamma subunit 2 0