Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P52488	Lignosulfonic acid	490.0985	491.1080	143
P54882		671.1545	672.1618	143
P55354	Pulcherrimin E	630.2454	631.2535	143
P00694	Stealthin C	307.0854	308.0931	142
P03711	Monodictyochrome A	566.1731	567.1841	142
P03792	Meridianin A	226.0868	227.0936	142
P09624		475.1174	476.1219	142
P12084	N'-[2-(3,5-Difluorophenyl)-2-hydroxyacetyl]-2-ethyl-4-hydroxy-3-methylbenzohydrazide	364.1264	365.1345	142
P20838	2-Naphthalen-1-ylbutanoic acid	214.0986	215.1051	142
P20865	Ethoxychelerythrine	391.1430	392.1495	142

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G209400		hypothetical protein	AT3G23280:XBAT35:uncharacterized protein__AT4G14365:XBAT34:uncharacterized protein
Glyma.20G209500		hypothetical protein	AT4G14380:AT4G14380:cotton fiber protein
Glyma.20G209600		hypothetical protein	NA
Glyma.20G209700	MYB29B2	MYB/HD-like transcription factor	NA
Glyma.20G209800		hypothetical protein	AT2G31200:ADF6:actin depolymerizing factor 6
Glyma.20G209900		hypothetical protein	AT1G04400:CRY2:cryptochrome 2
Glyma.20G210000		hypothetical protein	NA
Glyma.20G210100		hypothetical protein	NA
Glyma.20G210200		hypothetical protein	NA
Glyma.20G210400		hypothetical protein	AT4G14550:IAA14:indole-3-acetic acid inducible 14