Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00589	Lykurim	364.0967	365.1018	159
P00715	Loviride	350.0610	351.0678	159
P03958	Asperpyrone A	572.1410	573.1433	159
P05872	Formebolone	344.2031	345.2088	159
P08490	Torokonine	449.2231	450.2264	159
P10909	7-(3-((3-Formylphenoxy)methyl)-1,5-dimethyl-1H-pyrazol-4-yl)-3-(3-(naphthalen-1-yloxy)propyl)-1H-indole-2-carboxylic acid	573.2300	574.2360	159
P13378	(L-Threonyl)adenylate	448.1096	449.1147	159
P17048		761.2212	762.2314	159
P19069		353.5640	354.5707	159
P29235		467.7279	468.7315	159

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G209400		hypothetical protein	AT3G23280:XBAT35:uncharacterized protein__AT4G14365:XBAT34:uncharacterized protein
Glyma.20G209500		hypothetical protein	AT4G14380:AT4G14380:cotton fiber protein
Glyma.20G209600		hypothetical protein	NA
Glyma.20G209700	MYB29B2	MYB/HD-like transcription factor	NA
Glyma.20G209800		hypothetical protein	AT2G31200:ADF6:actin depolymerizing factor 6
Glyma.20G209900		hypothetical protein	AT1G04400:CRY2:cryptochrome 2
Glyma.20G210000		hypothetical protein	NA
Glyma.20G210100		hypothetical protein	NA
Glyma.20G210200		hypothetical protein	NA
Glyma.20G210400		hypothetical protein	AT4G14550:IAA14:indole-3-acetic acid inducible 14