Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54778 8'-Hydroxy-3-methoxy isodiospyrin 420.0827 421.0871 —
P54779 beta-Doradecin 580.3892 581.3981 —
P54780 Pirenzepine 351.1705 352.1780 —
P54782 Tripeptide 549.2479 550.2541 —
P54783 16S-methyl-sphing-4-enine 313.2937 314.3018 —
P54784 D-Glucosyldihydrosphingosine 463.3451 464.3554 —
P54786 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2579 391.2624 —
P54788 17beta-Hydroxy-7alpha-methylandrost-4-en-3-one 302.2187 303.2265 —
P54790 Leucyl-Threonine 232.1438 233.1507 —
P54795 Foetisulfide A 224.0352 225.0433 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G207300 hypothetical protein NA 0
Glyma.20G207400 hypothetical protein AT2G33470:GLTP1:glycolipid transfer protein 1 0
Glyma.20G207500 hypothetical protein AT2G20450:AT2G20450:Ribosomal protein L14 0
Glyma.20G207600 hypothetical protein NA 0
Glyma.20G207700 hypothetical protein AT5G43310:AT5G43310:COP1-interacting protein-like protein 0
Glyma.20G207800 hypothetical protein AT3G23350:AT3G23350:ENTH/VHS family protein 0
Glyma.20G207900 hypothetical protein NA 0
Glyma.20G208000 hypothetical protein NA 0
Glyma.20G208100 hypothetical protein AT1G19800:ABCI14:trigalactosyldiacylglycerol 1 0
Glyma.20G208200 hypothetical protein NA 0