Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G203700 hypothetical protein AT3G23240:ERF1:ethylene response factor 1 0
Glyma.20G203900 hypothetical protein NA 0
Glyma.20G204000 PT13 NA 0
Glyma.20G204200 hypothetical protein AT3G62840:AT3G62840:Small nuclear ribonucleoprotein family protein 0
Glyma.20G204400 SEOr NA 0
Glyma.20G204500 SEOs NA 0
Glyma.20G204600 hypothetical protein AT5G06430:AT5G06430:Thioredoxin superfamily protein 0
Glyma.20G204700 hypothetical protein AT3G22900:NRPD7:RNA polymerase Rpb7-like, N-terminal domain-containing protein__AT4G14660:NRPE7:RNA polymerase Rpb7-like, N-terminal domain-containing protein 0
Glyma.20G204800 hypothetical protein NA 0
Glyma.20G204900 hypothetical protein NA 0