Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30783 CDP-DG(18:1(12Z)-2OH(9,10)/a-17:0) 1025.5353 1026.5433 159
P49619 Rapisterone 508.3340 509.3432 159
P54107 N-(Sulfonatooxy)prop-2-enimidothioate 196.9815 197.9888 159
P00722 142.1090 143.1161 158
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 171.0455 158
P05070 Flunoxaprofen 285.0822 286.0878 158
P08637 Melrosin A 476.1729 477.1829 158
P09407 Fura-2 641.1573 642.1634 158
P09940 Serdexmethylphenidate 499.1991 500.2024 158
P10501 Cyamemazine 323.1472 324.1527 158

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G202200 hypothetical protein AT3G23150:ETR2:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G202300 hypothetical protein NA 0
Glyma.20G202400 hypothetical protein NA 0
Glyma.20G202500 hypothetical protein AT3G23160:AT3G23160:plant/protein (DUF668) 0
Glyma.20G202900 hypothetical protein AT5G43460:AT5G43460:HR-like lesion-inducing protein-like protein__AT1G04340:AT1G04340:HR-like lesion-inducing protein-like protein 0
Glyma.20G203200 hypothetical protein AT5G43430:ETFBETA:electron transfer flavoprotein beta 0
Glyma.20G203300 hypothetical protein AT5G60340:AAK6:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G203400 hypothetical protein AT5G43420:AT5G43420:RING/U-box superfamily protein__AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G203500 hypothetical protein AT5G43410:AT5G43410:Integrase-type DNA-binding superfamily protein 0
Glyma.20G203600 hypothetical protein NA 0