Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P47365 460.7583 461.7632 119
P47387 (2S)-3-(1H-Indol-3-yl)-N-[[1-(4-methoxyphenyl)cyclohexyl]methyl]-2-[(4-nitrophenyl)carbamoylamino]propanamide 569.2634 570.2722 119
P50923 2-(8-[3]-ladderane-octanyl)-sn-glycero-3-phosphocholine 529.3579 530.3650 119
P52902 Tyrosyl-Gamma-glutamate 309.1304 310.1358 119
P01956 6,2'4'-Trihydroxy-2-phenylbenzofuran 242.0592 243.0658 118
P04366 1-Guanidino-1-deoxy-scyllo-inositol 4-phosphate 301.0725 302.0797 118
P04884 Anhalidine 223.1170 224.1254 118
P06520 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1230 341.1301 118
P06623 5-Formylbenzofuran 146.0367 147.0447 118
P09032 10,20-Dehydro[12,13-dehydroprolyl]-2-(1',1'-dimethylallyltryptophyl)diketopiperazine 347.1648 348.1720 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G202200 hypothetical protein AT3G23150:ETR2:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G202300 hypothetical protein NA 0
Glyma.20G202400 hypothetical protein NA 0
Glyma.20G202500 hypothetical protein AT3G23160:AT3G23160:plant/protein (DUF668) 0
Glyma.20G202900 hypothetical protein AT5G43460:AT5G43460:HR-like lesion-inducing protein-like protein__AT1G04340:AT1G04340:HR-like lesion-inducing protein-like protein 0
Glyma.20G203200 hypothetical protein AT5G43430:ETFBETA:electron transfer flavoprotein beta 0
Glyma.20G203300 hypothetical protein AT5G60340:AAK6:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G203400 hypothetical protein AT5G43420:AT5G43420:RING/U-box superfamily protein__AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G203500 hypothetical protein AT5G43410:AT5G43410:Integrase-type DNA-binding superfamily protein 0
Glyma.20G203600 hypothetical protein NA 0