Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08554 Jasminoside A 330.1644 331.1724 127
P10082 Trifuhalol B 390.0587 391.0660 127
P10739 Antibiotic D 788-7 515.1878 516.1962 127
P10870 Isorhamnetin 3-sophoroside-7-glucoside 802.2147 803.2205 127
P12319 Didemethylcitalopram 296.1334 297.1412 127
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 283.0815 127
P14285 Triethylene glycol dimethacrylate 286.1392 287.1451 127
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 347.1558 127
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 965.2932 127
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 564.1089 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G202200 hypothetical protein AT3G23150:ETR2:Signal transduction histidine kinase, hybrid-type, ethylene sensor 0
Glyma.20G202300 hypothetical protein NA 0
Glyma.20G202400 hypothetical protein NA 0
Glyma.20G202500 hypothetical protein AT3G23160:AT3G23160:plant/protein (DUF668) 0
Glyma.20G202900 hypothetical protein AT5G43460:AT5G43460:HR-like lesion-inducing protein-like protein__AT1G04340:AT1G04340:HR-like lesion-inducing protein-like protein 0
Glyma.20G203200 hypothetical protein AT5G43430:ETFBETA:electron transfer flavoprotein beta 0
Glyma.20G203300 hypothetical protein AT5G60340:AAK6:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G203400 hypothetical protein AT5G43420:AT5G43420:RING/U-box superfamily protein__AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G203500 hypothetical protein AT5G43410:AT5G43410:Integrase-type DNA-binding superfamily protein 0
Glyma.20G203600 hypothetical protein NA 0