Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54650 Indane 118.0771 119.0836 —
P54653 N-(Sulfonatooxy)prop-2-enimidothioate 196.9830 197.9910 —
P54661 163.9741 164.9816 —
P54663 231.9051 232.9122 —
P54664 Kupitengester 1 637.2585 638.2677 —
P54665 6-Decenoylcarnitine 313.2232 627.4555 —
P54667 Tonapofylline 488.1209 489.1259 —
P54668 239.2316 240.2383 —
P54670 604.0611 605.0630 —
P54678 Calix[6]arene 636.2522 637.2633 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G201000 hypothetical protein NA 0
Glyma.20G201100 hypothetical protein AT2G33390:AT2G33390:uncharacterized protein 0
Glyma.20G201200 hypothetical protein AT2G33400:AT2G33400:FK506-binding nuclear-like protein 0
Glyma.20G201300 hypothetical protein AT2G33410:AT2G33410:RNA-binding (RRM/RBD/RNP motifs) family protein 0
Glyma.20G201400 hypothetical protein AT3G23470:AT3G23470:Cyclopropane-fatty-acyl-phospholipid synthase__AT3G23530:AT3G23530:Cyclopropane-fatty-acyl-phospholipid synthase 0
Glyma.20G201500 hypothetical protein AT2G33420:AT2G33420:__AT1G04470:AT1G04470: 0
Glyma.20G201800 hypothetical protein NA 0
Glyma.20G201900 hypothetical protein NA 0
Glyma.20G202000 hypothetical protein NA 0
Glyma.20G202100 hypothetical protein AT5G43560:AT5G43560:TRAF-like superfamily protein__AT1G04300:AT1G04300:TRAF-like superfamily protein 0