Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G200000 hypothetical protein NA 0
Glyma.20G200100 hypothetical protein AT1G25360:AT1G25360:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G200200 hypothetical protein AT1G04520:PDLP2:plasmodesmata-located protein 2 0
Glyma.20G200300 hypothetical protein AT2G05590:AT2G05590:TLD-domain containing nucleolar protein 0
Glyma.20G200400 hypothetical protein NA 0
Glyma.20G200500 hypothetical protein NA 0
Glyma.20G200600 hypothetical protein NA 0
Glyma.20G200700 hypothetical protein AT2G33360:AT2G33360:cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) 0
Glyma.20G200800 hypothetical protein AT5G64816:AT5G64816:thionin-like protein 0
Glyma.20G200900 hypothetical protein NA 0