Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41898 546.7256 547.7355 141
P45366 Dechlorobarbamide 426.0934 427.1001 141
P48034 Halaminol B 199.1920 200.1999 141
P48323 1-Oleoylglycerophosphocholine 521.3420 522.3497 141
P54222 671.1509 672.1589 141
P05856 Midodrine 254.1227 255.1311 140
P07220 Polyanethole-sulfate 228.0448 229.0527 140
P07629 741.0583 742.0664 140
P10273 5-Imino-2-methyl-1-cyclopenten-1-ol 111.0682 112.0755 140
P20165 (+)-Cheimonophyllal 282.1437 283.1503 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G199000 hypothetical protein AT4G17740:AT4G17740:Peptidase S41 family protein 0
Glyma.20G199100 hypothetical protein AT2G33255:AT2G33255:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0
Glyma.20G199200 hypothetical protein NA 0
Glyma.20G199300 hypothetical protein AT4G13480:MYB79:myb domain protein 79__AT3G24310:MYB305:myb domain protein 305 0
Glyma.20G199400 hypothetical protein NA 0
Glyma.20G199500 hypothetical protein AT1G48200:AT1G48200:uncharacterized protein 0
Glyma.20G199600 3-isopropylmalate dehydratase large subunit, chloroplastic AT4G13430:IIL1:isopropyl malate isomerase large subunit 1 0
Glyma.20G199700 hypothetical protein AT2G33320:AT2G33320:Calcium-dependent lipid-binding (CaLB domain) family protein__AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G199800 hypothetical protein NA 0
Glyma.20G199900 hypothetical protein NA 0