Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08612 Scrophuloside A7 752.2562 753.2657 161
P13827 (3-Nitrobenzoyl)alanine 238.0564 239.0640 161
P16053 Luteolin 7-galacturonide-4'-glucoside 624.1286 625.1388 161
P21570 (6E)-8-Oxogeraniol 168.1140 169.1209 161
P26728 1-nonen-3-one 140.1196 141.1267 161
P30204 Theasaponin C1 1174.5741 1175.5812 161
P36301 Dactylamide A 448.2163 449.2208 161
P46130 AMD 070 349.2298 350.2359 161
P50455 Carrageenan, potassium salt of 347.2545 348.2597 161
P11076 Amino leucine 146.1063 147.1143 160

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G199000 hypothetical protein AT4G17740:AT4G17740:Peptidase S41 family protein 0
Glyma.20G199100 hypothetical protein AT2G33255:AT2G33255:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0
Glyma.20G199200 hypothetical protein NA 0
Glyma.20G199300 hypothetical protein AT4G13480:MYB79:myb domain protein 79__AT3G24310:MYB305:myb domain protein 305 0
Glyma.20G199400 hypothetical protein NA 0
Glyma.20G199500 hypothetical protein AT1G48200:AT1G48200:uncharacterized protein 0
Glyma.20G199600 3-isopropylmalate dehydratase large subunit, chloroplastic AT4G13430:IIL1:isopropyl malate isomerase large subunit 1 0
Glyma.20G199700 hypothetical protein AT2G33320:AT2G33320:Calcium-dependent lipid-binding (CaLB domain) family protein__AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G199800 hypothetical protein NA 0
Glyma.20G199900 hypothetical protein NA 0