Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24272 Triptregeline H 611.2343 612.2392 208
P29806 116.0256 117.0329 208
P34523 Pseudouroporphyrin 786.2351 787.2411 208
P54031 Leucamide A 611.2525 612.2561 208
P20549 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1583 290.1651 207
P25985 Rhamnazin 3-isorhamninoside 784.2535 785.2637 207
P27517 363.3063 364.3112 207
P28775 N-Acetyl-7-O-acetylneuraminate 351.1174 352.1259 207
P29805 790.1370 791.1473 207
P32329 1-Methyl-2-n-hexylbenzene 176.1546 177.1623 207

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G199000 hypothetical protein AT4G17740:AT4G17740:Peptidase S41 family protein 0
Glyma.20G199100 hypothetical protein AT2G33255:AT2G33255:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0
Glyma.20G199200 hypothetical protein NA 0
Glyma.20G199300 hypothetical protein AT4G13480:MYB79:myb domain protein 79__AT3G24310:MYB305:myb domain protein 305 0
Glyma.20G199400 hypothetical protein NA 0
Glyma.20G199500 hypothetical protein AT1G48200:AT1G48200:uncharacterized protein 0
Glyma.20G199600 3-isopropylmalate dehydratase large subunit, chloroplastic AT4G13430:IIL1:isopropyl malate isomerase large subunit 1 0
Glyma.20G199700 hypothetical protein AT2G33320:AT2G33320:Calcium-dependent lipid-binding (CaLB domain) family protein__AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G199800 hypothetical protein NA 0
Glyma.20G199900 hypothetical protein NA 0