Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03225 Chlorambucil-tertiary butyl ester 359.1400 360.1461 210
P05139 310.6259 311.6315 210
P27684 309.2743 310.2795 210
P04549 Cyclosulfamuron 421.1071 422.1091 209
P13108 Bms-707035 410.1081 411.1142 209
P14970 Benzonaphthazepine 243.1062 244.1135 209
P44253 285.6155 286.6223 209
P50982 Oleamide 281.2671 282.2752 209
P16775 PA(10:0/13:0) 522.3343 523.3435 208
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 517.2397 208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G199000 hypothetical protein AT4G17740:AT4G17740:Peptidase S41 family protein 0
Glyma.20G199100 hypothetical protein AT2G33255:AT2G33255:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0
Glyma.20G199200 hypothetical protein NA 0
Glyma.20G199300 hypothetical protein AT4G13480:MYB79:myb domain protein 79__AT3G24310:MYB305:myb domain protein 305 0
Glyma.20G199400 hypothetical protein NA 0
Glyma.20G199500 hypothetical protein AT1G48200:AT1G48200:uncharacterized protein 0
Glyma.20G199600 3-isopropylmalate dehydratase large subunit, chloroplastic AT4G13430:IIL1:isopropyl malate isomerase large subunit 1 0
Glyma.20G199700 hypothetical protein AT2G33320:AT2G33320:Calcium-dependent lipid-binding (CaLB domain) family protein__AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G199800 hypothetical protein NA 0
Glyma.20G199900 hypothetical protein NA 0