Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04174 Mesifurane 142.0615 143.0689 125
P07352 Benzoxazole 119.0351 120.0432 125
P14288 N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide 287.1828 288.1891 125
P16266 Fibraurinoside 534.1755 535.1865 125
P19931 N-Despropyl-rotigotine 273.1184 274.1254 125
P20138 Antibiotic KA 7367B 200.1542 201.1617 125
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 607.2079 125
P20356 Cochinchinenin 514.2035 515.2126 125
P20898 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1238 173.1309 125
P30615 384.6477 385.6534 125

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G199000 hypothetical protein AT4G17740:AT4G17740:Peptidase S41 family protein 0
Glyma.20G199100 hypothetical protein AT2G33255:AT2G33255:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0
Glyma.20G199200 hypothetical protein NA 0
Glyma.20G199300 hypothetical protein AT4G13480:MYB79:myb domain protein 79__AT3G24310:MYB305:myb domain protein 305 0
Glyma.20G199400 hypothetical protein NA 0
Glyma.20G199500 hypothetical protein AT1G48200:AT1G48200:uncharacterized protein 0
Glyma.20G199600 3-isopropylmalate dehydratase large subunit, chloroplastic AT4G13430:IIL1:isopropyl malate isomerase large subunit 1 0
Glyma.20G199700 hypothetical protein AT2G33320:AT2G33320:Calcium-dependent lipid-binding (CaLB domain) family protein__AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G199800 hypothetical protein NA 0
Glyma.20G199900 hypothetical protein NA 0