Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54723 108.0103 109.0175 —
P54725 dehydro-beta-Ionone 190.1356 191.1415 —
P54726 Austronine 619.2163 620.2249 —
P54729 TRI-O-CRESYL PHOSPHATE 368.1149 369.1221 —
P54730 1,2-di-(2E,4E-octadienoyl)-sn-glycero-3-phosphocholine 501.2500 502.2556 —
P54731 Austroinulin 322.2473 323.2552 —
P54733 230.8916 231.8991 —
P54734 436.0756 437.0861 —
P54735 Isopyruthaldine 768.3599 769.3663 —
P54737 N-Nitrosobis(2-hydroxypropyl)amine 162.1020 325.2113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G197600 hypothetical protein NA 0
Glyma.20G197700 hypothetical protein AT1G04650:AT1G04650:holliday junction resolvase 0
Glyma.20G197800 hypothetical protein NA 0
Glyma.20G197900 hypothetical protein AT4G13690:AT4G13690:RNA-binding protein 0
Glyma.20G198000 hypothetical protein AT3G24180:AT3G24180:Beta-glucosidase, GBA2 type family protein 0
Glyma.20G198100 hypothetical protein AT4G13670:PTAC5:plastid transcriptionally active 5 0
Glyma.20G198300 Structural maintenance of chromosomes protein 5 AT5G15920:SMC5:structural maintenance of chromosomes 5 0
Glyma.20G198500 hypothetical protein AT2G38880:NF-YB1:nuclear factor Y, subunit B1 0
Glyma.20G198700 hypothetical protein NA 0
Glyma.20G198800 hypothetical protein NA 0