Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00823	(-)-Mintlactone	306.0213	307.0281	164
P07492	Polypropylene glycol (m w 1,200-3,000)	134.0949	135.1012	164
P10281	Undeca-2,4,6-trienedioyl-CoA	959.2076	960.2157	164
P15662		513.2875	514.2951	164
P18935	Marchantin P	438.1840	439.1899	164
P22654	Excavatolide D	524.2197	525.2274	164
P32650	Thonzylamine	286.1756	287.1822	164
P34351	Arginylglutamine	302.1710	605.3489	164
P48467	13-Apo-beta-carotenone	258.1964	259.2031	164
P01110	(R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one	174.1043	175.1111	163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G197600	hypothetical protein	NA
Glyma.20G197700	hypothetical protein	AT1G04650:AT1G04650:holliday junction resolvase
Glyma.20G197800	hypothetical protein	NA
Glyma.20G197900	hypothetical protein	AT4G13690:AT4G13690:RNA-binding protein
Glyma.20G198000	hypothetical protein	AT3G24180:AT3G24180:Beta-glucosidase, GBA2 type family protein
Glyma.20G198100	hypothetical protein	AT4G13670:PTAC5:plastid transcriptionally active 5
Glyma.20G198300	Structural maintenance of chromosomes protein 5	AT5G15920:SMC5:structural maintenance of chromosomes 5
Glyma.20G198500	hypothetical protein	AT2G38880:NF-YB1:nuclear factor Y, subunit B1
Glyma.20G198700	hypothetical protein	NA
Glyma.20G198800	hypothetical protein	NA