Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P09497	2,5-Dimethylfuran	96.0575	97.0642	193
P10553		299.1808	300.1868	193
P18019	AH 135Y	291.1104	292.1177	193
P29144	2-Hexyl-5-methyl-3(2H)-furanone	182.1294	183.1365	193
P37333	Xanthobaccin C	494.2826	495.2901	193
P40190	Tasumatrol F	632.2808	633.2882	193
P40307	Dolaconine	419.2601	420.2671	193
P00145	Limonenecarboxylic acid	180.1121	181.1181	192
P01028	Lamiridosin A	260.0890	261.0946	192
P03908		438.5879	439.5923	192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G197600	hypothetical protein	NA
Glyma.20G197700	hypothetical protein	AT1G04650:AT1G04650:holliday junction resolvase
Glyma.20G197800	hypothetical protein	NA
Glyma.20G197900	hypothetical protein	AT4G13690:AT4G13690:RNA-binding protein
Glyma.20G198000	hypothetical protein	AT3G24180:AT3G24180:Beta-glucosidase, GBA2 type family protein
Glyma.20G198100	hypothetical protein	AT4G13670:PTAC5:plastid transcriptionally active 5
Glyma.20G198300	Structural maintenance of chromosomes protein 5	AT5G15920:SMC5:structural maintenance of chromosomes 5
Glyma.20G198500	hypothetical protein	AT2G38880:NF-YB1:nuclear factor Y, subunit B1
Glyma.20G198700	hypothetical protein	NA
Glyma.20G198800	hypothetical protein	NA