Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P23907		968.2928	969.3031	132
P26825		850.3598	851.3632	132
P30950	14-Hydroxycathovaline	442.2134	443.2199	132
P33509	2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate	250.0469	251.0549	132
P34626	Microtoenin C	941.5073	942.5094	132
P55525		271.1993	272.2052	132
P04118	9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one	292.0726	293.0816	131
P06579	4-O-Methylascochlorin	418.1920	419.1981	131
P07063	Suffruticoside E	622.2095	623.2178	131
P08863		428.0566	429.0641	131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G197600	hypothetical protein	NA
Glyma.20G197700	hypothetical protein	AT1G04650:AT1G04650:holliday junction resolvase
Glyma.20G197800	hypothetical protein	NA
Glyma.20G197900	hypothetical protein	AT4G13690:AT4G13690:RNA-binding protein
Glyma.20G198000	hypothetical protein	AT3G24180:AT3G24180:Beta-glucosidase, GBA2 type family protein
Glyma.20G198100	hypothetical protein	AT4G13670:PTAC5:plastid transcriptionally active 5
Glyma.20G198300	Structural maintenance of chromosomes protein 5	AT5G15920:SMC5:structural maintenance of chromosomes 5
Glyma.20G198500	hypothetical protein	AT2G38880:NF-YB1:nuclear factor Y, subunit B1
Glyma.20G198700	hypothetical protein	NA
Glyma.20G198800	hypothetical protein	NA