Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34357 1-Acetyl-3-carboxy-tetrahydro-beta-carboline 258.0998 259.1059 134
P34381 3beta-sulfooxy-7beta-N-acetylglucosaminyl-5-cholen-24-oyl glycine 730.3366 731.3411 134
P37678 (-)-2,3-Dihydrocitromycetin 292.0572 293.0640 134
P42697 Formononetin 7-O-(6''-acetylglcoside) 472.1391 473.1469 134
P51957 Dovyalicin E 379.2204 380.2286 134
P55306 1-O-(2-methoxy-hexadecyl)-sn-glycerol 346.3034 347.3118 134
P03988 189.0592 190.0680 133
P07033 AICAR 338.0620 339.0683 133
P08028 Fipexide 388.1183 389.1270 133
P17685 Beta-Casomorphin-5 579.2640 580.2711 133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G196500 hypothetical protein NA 0
Glyma.20G196600 OLEO1 oleosin 1 AT4G25140:OLEO1:oleosin 1 0
Glyma.20G196700 hypothetical protein AT5G07490:AT5G07490:uncharacterized protein 0
Glyma.20G196900 SODB AT4G25100:FSD1:Fe superoxide dismutase 1 0
Glyma.20G197000 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 0
Glyma.20G197100 hypothetical protein NA 0
Glyma.20G197200 hypothetical protein NA 0
Glyma.20G197300 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G197400 hypothetical protein NA 0
Glyma.20G197500 hypothetical protein AT3G61420:AT3G61420:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)__AT1G55750:AT1G55750:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 0