Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43458 818.8998 819.9076 246
P00033 199.9632 200.9692 245
P15417 577.2031 578.2139 244
P41628 Cortolone-3-glucuronide 542.2743 543.2807 243
P09386 2-Methyl-5-vinylpyrazine 120.0674 121.0744 242
P22199 Homaline 490.3360 491.3421 241
P36928 Ligujapone 202.0983 203.1053 241
P39358 5,6-Dehydroalbine 230.1386 461.2870 241
P41069 DG(2:0/22:6(4Z,8Z,10Z,13Z,16Z,19Z)-OH(7)/0:0) 460.2787 461.2856 241
P35092 314.6285 315.6348 240

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G196500 hypothetical protein NA 0
Glyma.20G196600 OLEO1 oleosin 1 AT4G25140:OLEO1:oleosin 1 0
Glyma.20G196700 hypothetical protein AT5G07490:AT5G07490:uncharacterized protein 0
Glyma.20G196900 SODB AT4G25100:FSD1:Fe superoxide dismutase 1 0
Glyma.20G197000 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 0
Glyma.20G197100 hypothetical protein NA 0
Glyma.20G197200 hypothetical protein NA 0
Glyma.20G197300 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G197400 hypothetical protein NA 0
Glyma.20G197500 hypothetical protein AT3G61420:AT3G61420:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)__AT1G55750:AT1G55750:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 0